Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920182.1_cds_XP_016469374.1_61922
CDS Infomation

[gene=LOC107791755] [db_xref=GeneID:107791755] [protein=protein IQ-DOMAIN 1-like isoform X2] [protein_id=XP_016469374.1] [location=join(5991..6146,6343..6660,7348..7593,8270..8407,8500..9297)] [gbkey=CDS]
Sequence

ATGGGGAATAAGAAAGAAAGATCTTCATCTTCTTGGTTGACTGCTGTTAAAAGAGCTTTT
AGATCTCCTACTAAAGACCCTGACAAGAAGAAGCAAAATAAAAGAAGAGATGATAATAAT
CAACCTATGGAAGTTGACGAAGATGAAGAAGAAAAGAAGAAGGAAAAGAGAAGATGGCTT
TTCAGGAAGCCAACTAATCTTGAAAATGGGACAACACATCAGACTACGATTAAATCGGAG
AATGATGATGTGTCCACTCCTGCAGCTGAGGGAACGGACCAAAGGCATGCCATTGCAGTG
GCTGTCGCAACTGCAGCCGCGGCTCAGGCTGCAGTTGGCACAGCTCAGACAACTGCTGAA
ATAGCTCGACTTGTCAATCCGCCTGTTTCTAGATTCTATAGTTCTCCTATTTATGCTGGG
GATAGAGAGCATCAGGCTGCAATTATAATTCAGACAGCTTTCAGGGGATATCTGGCAAGA
AGGGCTCTAAAAGCATTAAAAGGTCTAGTAAAGTTGCAAGCTTTAGTGAGAGGTCACAAT
GTTCGGAAACAAGCGAAGATGACTCTCAGATGTATGCAAGCTCTTGTTAGAGTTCAAGCG
CGAGTACTTGACCAGCGGTTTAGGCAATCTCAAGAAGGAAGTAGAAAATCAACATTTAGT
GACACCAGTAGCATGTGGAATTCACAGTATCTTCAAGATATCACAGATAGAAAATCAATG
TCAAGGGATGGAAGCAGCATTCCAGATGATTGGGATGAAAGGCCACACACTATTGAAGAG
GTAAAAGCAATGTTACGAAAGAGAAAAGAAGCTGCTTTGAAACGCGAAAGGACCTTATCC
GACGCCTTCTCTCAACAGACACGGAGAGCAGGAAGAAATTCCTCGATAGGAAGTGAAAGT
GATTTTGGAGAAAAGCATCAATGGATGGACCGGTGGATGGCTGCGAAACCATGGGACAAC
AGCAGGGGAAGAGCATCAACTGATCAAAGTATTGACCCTGTTAAAACTGTTGAAATGGAT
ACGTCGCAACCTTATTCATATTTAGCTCCTAATTTAAGAAGATCAGATGAACGACAACAA
CATCAACAACACCAACGACCAAGTTCACCCCTTCATATATCCTACCAAAATCAATCTTTT
CAATTCCCTGTTACACCTTCTCCATCCAAAACACGACCTATTCAAGTCCGTTCTGCAAGT
CCTCGATGTCCAAGAGACGACAGAAGTAATAACGGAGCTCAAACTCCAAGCCTGAAGCCT
AATAGTAACTACTCATTCAATGGTATCTCACACCAACGTAATAGACCAACTCCCGGTGCT
GCACCAATTCCCAACTATATGGCTGCTACCGAGTCTGCCTTGGCAAGAATCCGTTCACAA
AGCGCCCCACGACAGAGGCCTTCAACCCCGGAGAGGGATCGAGCAGGGTCAGCTAAGAAA
CGGCTTTCTTTCCCTGTCCCTGACCGTTATGGCAATATTCCTATAGGTTATGAAGCAGGG
TATGAACATAGTCTGAGGAGTCCAAGCTTTAAGAGCCTTAATGGAGTACATTTCGTATAT
GAACAACAATCTAACTATTCTTCTTGTTGCACGGAGAGTCTTGGTGGCGAGATCTCTCCT
TCATCAACAAGCGATTTGAGGAGGTATTTGAGGTAA

Peptide Sequence

PEP ID

XP_016469374.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like isoform X2 [Nicotiana tabacum]
Sequence

MGNKKERSSSSWLTAVKRAFRSPTKDPDKKKQNKRRDDNNQPMEVDEDEEEKKKEKRRWL
FRKPTNLENGTTHQTTIKSENDDVSTPAAEGTDQRHAIAVAVATAAAAQAAVGTAQTTAE
IARLVNPPVSRFYSSPIYAGDREHQAAIIIQTAFRGYLARRALKALKGLVKLQALVRGHN
VRKQAKMTLRCMQALVRVQARVLDQRFRQSQEGSRKSTFSDTSSMWNSQYLQDITDRKSM
SRDGSSIPDDWDERPHTIEEVKAMLRKRKEAALKRERTLSDAFSQQTRRAGRNSSIGSES
DFGEKHQWMDRWMAAKPWDNSRGRASTDQSIDPVKTVEMDTSQPYSYLAPNLRRSDERQQ
HQQHQRPSSPLHISYQNQSFQFPVTPSPSKTRPIQVRSASPRCPRDDRSNNGAQTPSLKP
NSNYSFNGISHQRNRPTPGAAPIPNYMAATESALARIRSQSAPRQRPSTPERDRAGSAKK
RLSFPVPDRYGNIPIGYEAGYEHSLRSPSFKSLNGVHFVYEQQSNYSSCCTESLGGEISP
SSTSDLRRYLR

Transcript Sequence

Gene sequence data has not been registered.